Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922048.1_cds_XP_016470868.1_63270
CDS Infomation

[gene=LOC107793096] [db_xref=GeneID:107793096] [protein=premnaspirodiene oxygenase] [protein_id=XP_016470868.1] [location=join(20111..20998,21144..21764)] [gbkey=CDS]
Sequence

ATGCAGTTCTTCAGCTTGGTTTCCATTTTCCTATTTCTATCTTTTCTCTTTTTGTTAAGG
AAATGGAAGAACTCGAATAGCCAAAGGAAAAAATTGCCACCAGGTCCATGGAAACTACCA
ATACTAGGAAGTATGCTTCATATGGTTGGTGGACTACCACACCATGTCCTTAGAGATTTA
GCCAAAAAATATGGACCGCTTATGCACCTTCAATTAGGTGAAGTTTCTGCAGTTGTGGTT
ACTTCTCCTGATATGGCAAAAGAAGTACTAAAAACTCATGACATCGCTTTCGCGTCTAGG
CCTAGCCTTTTGGCCCCGGAGATTGTCTGTTACAATAGGTCTGATCTTGCGTTTTGCCCC
TATGGCGATTATTGGAGACAAATGCGTAAAATATGTGTCTTGGAAGTGCTCAGTGCCAAG
AATGTTCGGACATATAGCTCTATTAGGCGCGATGAAGTTCTTCGTCTCCTTAATTTTATC
CGGTCATCTTCTGGTGAGCCTGTTAATATTACGGAAAGGATCTTTTTGTTCACAAGCTCC
ATGACATGTAGATCAGCGTTTGGGCAAGTATTCAAGGAGCAAGACAAATTTATACAACTA
ATTAAAGAAGTTATACTCTTAGCAGGAGGGTTTGATGTGGCTGACATATTCCCTTCATAC
AAGTTTCTTCATGTGCTCAGTGGAATGAAGGGTAAGATTATGAATGCACACCATAAGGTA
GATGCTATTGTTGAGAATGTCATCAACGAGCACAAGAAAAATCTTGCAATTGGGAAAACT
AATGGAGCGTTAGGAGGTGAAGATTTAATTGATGTTCTTCTAAAACTTATGAATGATGGA
GGCCTTCAATTTCCTATCACCAACGACAACATCAAAGCTATAATCTTTGACATGTTTGCT
GCTGGAACAGAGACTTCATCGTCAACAATTGTGTGGGCTATGGTGGAAATGGTGAAAAAT
CCAACTGTATTTGCGAAAGCTCAAGCAGAAGTAAGAGATGCATTTAGAGAAAAAGAAACT
TTTGATGAAAATGATGTGGAGGAGCTAAACTATCTAAAGTTAGTCATTAAAGAAACTCTA
AGACTTCATCCACCGGTTCCACTTTTGCTCCCAAGAGAATGTAGGGAAGAGACAAATATA
AACGGCTACACTATTCCTGTAAAGACCAAAGTCATGGTTAATGTTTGGGCATTGGGAAGA
GATCCAAAATATTGGGATGATGCAGAAACTTTTAAGCCAGAGAGATTTGAGCAGTGCTCT
AAGGATTTTGTTGGTAATAATTTTGAATATCTTCCATTTGGTGGTGGAAGGAGGATTTGT
CCAGGGATTTCGTTTGGTTTAGCTAATGCTTATTTGCCATTGGCTCAATTACTTTATCAC
TTTGATTGGGAACTCCCCACTGGAATCAAACCAAGCGACTTGGACTTGACTGAGTTGGTT
GGAGTAACTGCCGCTAGAAAAAGTGACCTTTACTTGGTTGCGACTCCTTATCAACCTCCT
CAAAACTGA

Peptide Sequence

PEP ID

XP_016470868.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase [Nicotiana tabacum]
Sequence

MQFFSLVSIFLFLSFLFLLRKWKNSNSQRKKLPPGPWKLPILGSMLHMVGGLPHHVLRDL
AKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPSLLAPEIVCYNRSDLAFCP
YGDYWRQMRKICVLEVLSAKNVRTYSSIRRDEVLRLLNFIRSSSGEPVNITERIFLFTSS
MTCRSAFGQVFKEQDKFIQLIKEVILLAGGFDVADIFPSYKFLHVLSGMKGKIMNAHHKV
DAIVENVINEHKKNLAIGKTNGALGGEDLIDVLLKLMNDGGLQFPITNDNIKAIIFDMFA
AGTETSSSTIVWAMVEMVKNPTVFAKAQAEVRDAFREKETFDENDVEELNYLKLVIKETL
RLHPPVPLLLPRECREETNINGYTIPVKTKVMVNVWALGRDPKYWDDAETFKPERFEQCS
KDFVGNNFEYLPFGGGRRICPGISFGLANAYLPLAQLLYHFDWELPTGIKPSDLDLTELV
GVTAARKSDLYLVATPYQPPQN

Transcript Sequence

Gene sequence data has not been registered.